{
  "_id": "6a1f3076b401979e7342782f",
  "Package": "infectiousR",
  "Type": "Package",
  "Title": "Access Infectious and Epidemiological Data via 'disease.sh API'",
  "Version": "0.1.2",
  "Maintainer": "Renzo Caceres Rossi <arenzocaceresrossi@gmail.com>",
  "Description": "Provides functions to access real-time infectious disease\ndata from the 'disease.sh API', including COVID-19 global, US\nstates, continent, and country statistics, vaccination\ncoverage, influenza-like illness data from the Centers for\nDisease Control and Prevention (CDC), and more. Also includes\ncurated datasets on a variety of infectious diseases such as\ninfluenza, measles, dengue, Ebola, tuberculosis, meningitis,\nAIDS, and others. The package supports epidemiological research\nand data analysis by combining API access with high-quality\nhistorical and survey datasets on infectious diseases. For more\ndetails on the 'disease.sh API', see <https://disease.sh/>.",
  "License": "GPL-3",
  "URL": "https://github.com/lightbluetitan/infectiousr,\nhttps://lightbluetitan.github.io/infectiousr/",
  "BugReports": "https://github.com/lightbluetitan/infectiousr/issues",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "Authors@R": "person(\ngiven = \"Renzo\",\nfamily = \"Caceres Rossi\",\nrole = c(\"aut\", \"cre\"),\nemail = \"arenzocaceresrossi@gmail.com\"\n)",
  "RoxygenNote": "7.3.2",
  "Config/testthat/edition": "3",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "libssl-dev",
  "Repository": "https://lightbluetitan.r-universe.dev",
  "Date/Publication": "2025-11-09 13:07:54 UTC",
  "RemoteUrl": "https://github.com/lightbluetitan/infectiousr",
  "RemoteRef": "HEAD",
  "RemoteSha": "6d2357d3c940897b146843433ea8c274fb0d1513",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-15 08:49:08 UTC",
    "User": "root"
  },
  "Author": "Renzo Caceres Rossi [aut, cre]",
  "MD5sum": "2e91850afca94fcda1de5bb8d07cb16a",
  "_user": "lightbluetitan",
  "_type": "src",
  "_file": "infectiousR_0.1.2.tar.gz",
  "_fileid": "fad321bb92bcd006408a79958b19114b0ae61757880a9e61b4d6a7f822c93659",
  "_filesize": 601178,
  "_sha256": "fad321bb92bcd006408a79958b19114b0ae61757880a9e61b4d6a7f822c93659",
  "_created": "2026-05-15T08:49:08.000Z",
  "_published": "2026-06-02T19:35:18.546Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79155824475,
      "time": 151,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7013438953"
    },
    {
      "job": 79155824501,
      "time": 134,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7013431886"
    },
    {
      "job": 79155824060,
      "time": 123,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7013428433"
    },
    {
      "job": 79155824550,
      "time": 75,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7013414654"
    },
    {
      "job": 79155823686,
      "time": 183,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7013394361"
    },
    {
      "job": 79155823288,
      "time": 109,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7367902761"
    },
    {
      "job": 79155824476,
      "time": 97,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7013420799"
    },
    {
      "job": 79155824490,
      "time": 97,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7013420798"
    },
    {
      "job": 79155823988,
      "time": 83,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7013416959"
    }
  ],
  "_buildurl": "https://github.com/r-universe/lightbluetitan/actions/runs/25908870603",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/lightbluetitan/infectiousr",
  "_commit": {
    "id": "6d2357d3c940897b146843433ea8c274fb0d1513",
    "author": "lightbluetitan <arenzocaceresrossi@gmail.com>",
    "committer": "lightbluetitan <arenzocaceresrossi@gmail.com>",
    "message": "v0.1.2 - Fix CRAN incoming check issues and improve API error handling\n",
    "time": 1762693674
  },
  "_maintainer": {
    "name": "Renzo Caceres Rossi",
    "email": "arenzocaceresrossi@gmail.com",
    "login": "lightbluetitan",
    "linkedin": "in/andrescaceresrossi",
    "uuid": 13672461
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.1.0",
      "role": "Depends"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "httr",
      "role": "Imports"
    },
    {
      "package": "jsonlite",
      "role": "Imports"
    },
    {
      "package": "lubridate",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Suggests"
    },
    {
      "package": "ggplot2",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "lightbluetitan",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-24",
      "n": 1
    },
    {
      "week": "2025-45",
      "n": 2
    }
  ],
  "_tags": [],
  "_stars": 8,
  "_contributors": [
    {
      "user": "lightbluetitan",
      "count": 3,
      "uuid": 13672461
    }
  ],
  "_userbio": {
    "uuid": 13672461,
    "type": "user",
    "name": "Renzo Cáceres Rossi",
    "description": "Soy un fanatico del Lenguaje de programación R ,  desarrollador de paquetes y metapaquetes para R y Python 🐍📦"
  },
  "_downloads": {
    "count": 1544,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/infectiousR"
  },
  "_devurl": "https://github.com/lightbluetitan/infectiousr",
  "_pkgdown": "https://lightbluetitan.github.io/infectiousr/",
  "_searchresults": 13,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/infectiousR.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/lightbluetitan/infectiousr",
  "_realowner": "lightbluetitan",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2025-06-16"
    },
    {
      "version": "0.1.1",
      "date": "2025-11-09"
    }
  ],
  "_exports": [
    "active_hepatitis_df",
    "aids_azt_df",
    "bcg_vaccine_df",
    "campy_infections_ts",
    "china_dengue_tbl_df",
    "contagious_diseases_df",
    "covid_mortality_df",
    "covid_new_york_df",
    "covid_severity_df",
    "diphtheria_philly_df",
    "ebola_cases_df",
    "ebola_sleone_df",
    "ebola_survey_tbl_df",
    "ecoli_infections_df",
    "ehec_infections_df",
    "flu_enrich_df",
    "fungal_infections_df",
    "get_covid_stats_by_continent",
    "get_covid_stats_by_country",
    "get_covid_stats_by_country_name",
    "get_covid_stats_for_state",
    "get_global_covid_stats",
    "get_influenza_cdc_ili",
    "get_us_states_covid_stats",
    "gonorrhea_ma_df",
    "hepatitisA_df",
    "india_dengue_tbl_df",
    "influenza_ice_df",
    "influenza_infections_df",
    "influenza_pneumonia_ts",
    "influenza_vax_survey_df",
    "korea_dengue_tbl_df",
    "malaria_mice_df",
    "measles_infections_df",
    "measles_survey_df",
    "meningitis_df",
    "rubella_austria_df",
    "rubella_peru_df",
    "sars_canada_df",
    "smallpox_nigeria_df",
    "spanish_flu_df",
    "streptomycin_tbl_df",
    "us_covid_cases_df",
    "view_datasets_infectiousR",
    "zika_girardot_df",
    "zika_sanandres_df"
  ],
  "_datasets": [
    {
      "name": "active_hepatitis_df",
      "title": "Chronic Active Hepatitis Clinical Trial",
      "object": "active_hepatitis_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "treatment",
        "time",
        "status"
      ],
      "rows": 44,
      "table": true,
      "tojson": true
    },
    {
      "name": "aids_azt_df",
      "title": "AIDS Symptoms and AZT Use Data",
      "object": "aids_azt_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "yes",
        "no",
        "azt",
        "race"
      ],
      "rows": 4,
      "table": true,
      "tojson": true
    },
    {
      "name": "bcg_vaccine_df",
      "title": "BCG Vaccine Effectiveness Against Tuberculosis",
      "object": "bcg_vaccine_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "trial",
        "author",
        "year",
        "tpos",
        "tneg",
        "cpos",
        "cneg",
        "ablat",
        "alloc"
      ],
      "rows": 13,
      "table": true,
      "tojson": true
    },
    {
      "name": "campy_infections_ts",
      "title": "Campylobacter Infections Time Series",
      "object": "campy_infections_ts",
      "class": [
        "ts"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "china_dengue_tbl_df",
      "title": "Dengue Cases in Mainland China (2005–2020)",
      "object": "china_dengue_tbl_df",
      "class": [
        "spec_tbl_df",
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "year",
        "dengue.cases.indigenous",
        "dengue.cases.imported",
        "counties.with.dengue.fever.indigenous",
        "counties.with.dengue.fever.imported"
      ],
      "rows": 16,
      "table": true,
      "tojson": true
    },
    {
      "name": "contagious_diseases_df",
      "title": "Contagious Disease Data for US States",
      "object": "contagious_diseases_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "disease",
        "state",
        "year",
        "weeks_reporting",
        "count",
        "population"
      ],
      "rows": 16065,
      "table": true,
      "tojson": true
    },
    {
      "name": "covid_mortality_df",
      "title": "COVID-19 Cardiovascular Mortality",
      "object": "covid_mortality_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "study",
        "beta",
        "se"
      ],
      "rows": 6,
      "table": true,
      "tojson": true
    },
    {
      "name": "covid_new_york_df",
      "title": "New York City COVID-19 Data",
      "object": "covid_new_york_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "date",
        "borough",
        "case",
        "hospitalization",
        "death"
      ],
      "rows": 615,
      "table": true,
      "tojson": true
    },
    {
      "name": "covid_severity_df",
      "title": "COVID-19 Cardiovascular Severity",
      "object": "covid_severity_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "study",
        "beta",
        "se"
      ],
      "rows": 6,
      "table": true,
      "tojson": true
    },
    {
      "name": "diphtheria_philly_df",
      "title": "Weekly Diphtheria Incidence in Philadelphia",
      "object": "diphtheria_philly_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "YEAR",
        "WEEK",
        "PHILADELPHIA",
        "TIME"
      ],
      "rows": 1774,
      "table": true,
      "tojson": true
    },
    {
      "name": "ebola_cases_df",
      "title": "Time Series Counts of Ebola Cases",
      "object": "ebola_cases_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "time",
        "clin_signs",
        "removals"
      ],
      "rows": 192,
      "table": true,
      "tojson": true
    },
    {
      "name": "ebola_sleone_df",
      "title": "Ebola Cases in Sierra Leone, Africa",
      "object": "ebola_sleone_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Day",
        "Cases"
      ],
      "rows": 110,
      "table": true,
      "tojson": true
    },
    {
      "name": "ebola_survey_tbl_df",
      "title": "Survey on Ebola Quarantine",
      "object": "ebola_survey_tbl_df",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "quarantine"
      ],
      "rows": 1042,
      "table": true,
      "tojson": true
    },
    {
      "name": "ecoli_infections_df",
      "title": "E. coli Infections Time Series",
      "object": "ecoli_infections_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "year",
        "week",
        "cases"
      ],
      "rows": 646,
      "table": true,
      "tojson": true
    },
    {
      "name": "ehec_infections_df",
      "title": "EHEC Infections Time Series",
      "object": "ehec_infections_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "year",
        "week",
        "cases"
      ],
      "rows": 646,
      "table": true,
      "tojson": true
    },
    {
      "name": "flu_enrich_df",
      "title": "Flu Enrichment Gene Data",
      "object": "flu_enrich_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "nflugenes",
        "setsize",
        "GO_terms"
      ],
      "rows": 5719,
      "table": true,
      "tojson": false
    },
    {
      "name": "fungal_infections_df",
      "title": "Fungal Infections Treatment Data",
      "object": "fungal_infections_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "success",
        "failure",
        "group",
        "center"
      ],
      "rows": 10,
      "table": true,
      "tojson": true
    },
    {
      "name": "gonorrhea_ma_df",
      "title": "Weekly Gonorrhea Cases in Massachusetts",
      "object": "gonorrhea_ma_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "number",
        "year",
        "week",
        "time"
      ],
      "rows": 422,
      "table": true,
      "tojson": true
    },
    {
      "name": "hepatitisA_df",
      "title": "Hepatitis A Prevalence in Bulgaria",
      "object": "hepatitisA_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "t",
        "freq1",
        "freq2"
      ],
      "rows": 83,
      "table": true,
      "tojson": true
    },
    {
      "name": "india_dengue_tbl_df",
      "title": "Dengue/DHF Situation in India Since 2017",
      "object": "india_dengue_tbl_df",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "area",
        "type",
        "year",
        "additional_information",
        "value"
      ],
      "rows": 432,
      "table": true,
      "tojson": true
    },
    {
      "name": "influenza_ice_df",
      "title": "Monthly Influenza Incidence in Iceland",
      "object": "influenza_ice_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "month",
        "year",
        "ili"
      ],
      "rows": 360,
      "table": true,
      "tojson": true
    },
    {
      "name": "influenza_infections_df",
      "title": "Influenza Infections Time Series",
      "object": "influenza_infections_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "year",
        "week",
        "cases"
      ],
      "rows": 646,
      "table": true,
      "tojson": true
    },
    {
      "name": "influenza_pneumonia_ts",
      "title": "US Pneumonia and Influenza Death Rates",
      "object": "influenza_pneumonia_ts",
      "class": [
        "ts"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "influenza_vax_survey_df",
      "title": "Influenza Vaccination Survey",
      "object": "influenza_vax_survey_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "survey",
        "freq",
        "subject",
        "response",
        "start_date",
        "end_date"
      ],
      "rows": 117,
      "table": true,
      "tojson": true
    },
    {
      "name": "korea_dengue_tbl_df",
      "title": "Imported Dengue Cases in Korea",
      "object": "korea_dengue_tbl_df",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "Country",
        "Region",
        "2011",
        "2012",
        "2013",
        "2014",
        "2015"
      ],
      "rows": 33,
      "table": true,
      "tojson": true
    },
    {
      "name": "malaria_mice_df",
      "title": "Daily Measures of Malaria-Infected Mice",
      "object": "malaria_mice_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Line",
        "Day",
        "Box",
        "Mouse",
        "Treatment",
        "Ind2",
        "Weight",
        "Glucose",
        "RBC",
        "Sample",
        "Para"
      ],
      "rows": 1300,
      "table": true,
      "tojson": true
    },
    {
      "name": "measles_infections_df",
      "title": "Measles Infections Time Series",
      "object": "measles_infections_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "year",
        "week",
        "cases"
      ],
      "rows": 646,
      "table": true,
      "tojson": true
    },
    {
      "name": "measles_survey_df",
      "title": "Measles Non-Vaccination Parent Survey",
      "object": "measles_survey_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "school",
        "form",
        "returnf",
        "consent",
        "hadmeas",
        "previmm",
        "sideeff",
        "gp",
        "noshot",
        "notser",
        "gpadv"
      ],
      "rows": 307,
      "table": true,
      "tojson": true
    },
    {
      "name": "meningitis_df",
      "title": "Meningococcal Data with Missing Response",
      "object": "meningitis_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Set",
        "CaseCntrl",
        "Reftime",
        "Numnill",
        "Numsleep",
        "Smoke"
      ],
      "rows": 60,
      "table": true,
      "tojson": true
    },
    {
      "name": "rubella_austria_df",
      "title": "Rubella Prevalence in Austrian Males",
      "object": "rubella_austria_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "t",
        "freq1",
        "freq2"
      ],
      "rows": 225,
      "table": true,
      "tojson": true
    },
    {
      "name": "rubella_peru_df",
      "title": "Rubella in Peru Data",
      "object": "rubella_peru_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "age",
        "incidence",
        "cumulative",
        "n"
      ],
      "rows": 95,
      "table": true,
      "tojson": true
    },
    {
      "name": "sars_canada_df",
      "title": "Severe Acute Respiratory Syndrome in Canada, 2003",
      "object": "sars_canada_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "date",
        "cases_travel",
        "cases_household",
        "cases_healthcare",
        "cases_other"
      ],
      "rows": 110,
      "table": true,
      "tojson": true
    },
    {
      "name": "smallpox_nigeria_df",
      "title": "Smallpox in Abakaliki, Nigeria, 1967",
      "object": "smallpox_nigeria_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "case_ID",
        "date_of_onset",
        "age",
        "gender",
        "vaccinated",
        "vaccscar",
        "ftc",
        "compound"
      ],
      "rows": 32,
      "table": true,
      "tojson": true
    },
    {
      "name": "spanish_flu_df",
      "title": "Daily 1918 Flu Deaths",
      "object": "spanish_flu_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Date",
        "Indiana",
        "Kansas",
        "Philadelphia"
      ],
      "rows": 122,
      "table": true,
      "tojson": true
    },
    {
      "name": "streptomycin_tbl_df",
      "title": "Tuberculosis Streptomycin RCT (1948)",
      "object": "streptomycin_tbl_df",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "patient_id",
        "arm",
        "dose_strep_g",
        "dose_PAS_g",
        "gender",
        "baseline_condition",
        "baseline_temp",
        "baseline_esr",
        "baseline_cavitation",
        "strep_resistance",
        "radiologic_6m",
        "rad_num",
        "improved"
      ],
      "rows": 107,
      "table": true,
      "tojson": true
    },
    {
      "name": "us_covid_cases_df",
      "title": "US Lab-Confirmed COVID-19 Cases",
      "object": "us_covid_cases_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "date",
        "cases"
      ],
      "rows": 1227,
      "table": true,
      "tojson": true
    },
    {
      "name": "zika_girardot_df",
      "title": "Zika in Girardot, Colombia, 2015",
      "object": "zika_girardot_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "date",
        "cases"
      ],
      "rows": 93,
      "table": true,
      "tojson": true
    },
    {
      "name": "zika_sanandres_df",
      "title": "Zika in San Andres, Colombia, 2015",
      "object": "zika_sanandres_df",
      "class": [
        "data.frame"
      ],
      "fields": [
        "date",
        "cases"
      ],
      "rows": 101,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "active_hepatitis_df",
      "title": "Chronic Active Hepatitis Clinical Trial",
      "topics": [
        "active_hepatitis_df"
      ]
    },
    {
      "page": "aids_azt_df",
      "title": "AIDS Symptoms and AZT Use Data",
      "topics": [
        "aids_azt_df"
      ]
    },
    {
      "page": "bcg_vaccine_df",
      "title": "BCG Vaccine Effectiveness Against Tuberculosis",
      "topics": [
        "bcg_vaccine_df"
      ]
    },
    {
      "page": "campy_infections_ts",
      "title": "Campylobacter Infections Time Series",
      "topics": [
        "campy_infections_ts"
      ]
    },
    {
      "page": "china_dengue_tbl_df",
      "title": "Dengue Cases in Mainland China (2005–2020)",
      "topics": [
        "china_dengue_tbl_df"
      ]
    },
    {
      "page": "contagious_diseases_df",
      "title": "Contagious Disease Data for US States",
      "topics": [
        "contagious_diseases_df"
      ]
    },
    {
      "page": "covid_mortality_df",
      "title": "COVID-19 Cardiovascular Mortality",
      "topics": [
        "covid_mortality_df"
      ]
    },
    {
      "page": "covid_new_york_df",
      "title": "New York City COVID-19 Data",
      "topics": [
        "covid_new_york_df"
      ]
    },
    {
      "page": "covid_severity_df",
      "title": "COVID-19 Cardiovascular Severity",
      "topics": [
        "covid_severity_df"
      ]
    },
    {
      "page": "diphtheria_philly_df",
      "title": "Weekly Diphtheria Incidence in Philadelphia",
      "topics": [
        "diphtheria_philly_df"
      ]
    },
    {
      "page": "ebola_cases_df",
      "title": "Time Series Counts of Ebola Cases",
      "topics": [
        "ebola_cases_df"
      ]
    },
    {
      "page": "ebola_sleone_df",
      "title": "Ebola Cases in Sierra Leone, Africa",
      "topics": [
        "ebola_sleone_df"
      ]
    },
    {
      "page": "ebola_survey_tbl_df",
      "title": "Survey on Ebola Quarantine",
      "topics": [
        "ebola_survey_tbl_df"
      ]
    },
    {
      "page": "ecoli_infections_df",
      "title": "E. coli Infections Time Series",
      "topics": [
        "ecoli_infections_df"
      ]
    },
    {
      "page": "ehec_infections_df",
      "title": "EHEC Infections Time Series",
      "topics": [
        "ehec_infections_df"
      ]
    },
    {
      "page": "flu_enrich_df",
      "title": "Flu Enrichment Gene Data",
      "topics": [
        "flu_enrich_df"
      ]
    },
    {
      "page": "fungal_infections_df",
      "title": "Fungal Infections Treatment Data",
      "topics": [
        "fungal_infections_df"
      ]
    },
    {
      "page": "get_covid_stats_by_continent",
      "title": "Get COVID-19 Statistics for All Continents",
      "topics": [
        "get_covid_stats_by_continent"
      ]
    },
    {
      "page": "get_covid_stats_by_country",
      "title": "Get COVID-19 Statistics for All Countries",
      "topics": [
        "get_covid_stats_by_country"
      ]
    },
    {
      "page": "get_covid_stats_by_country_name",
      "title": "Get COVID-19 Statistics for a Specific Country",
      "topics": [
        "get_covid_stats_by_country_name"
      ]
    },
    {
      "page": "get_covid_stats_for_state",
      "title": "Get COVID-19 Statistics for Specific US State(s)",
      "topics": [
        "get_covid_stats_for_state"
      ]
    },
    {
      "page": "get_global_covid_stats",
      "title": "Get Global COVID-19 Statistics",
      "topics": [
        "get_global_covid_stats"
      ]
    },
    {
      "page": "get_influenza_cdc_ili",
      "title": "Get CDC Influenza-like Illness (ILI) Data",
      "topics": [
        "get_influenza_cdc_ili"
      ]
    },
    {
      "page": "get_us_states_covid_stats",
      "title": "Get COVID-19 Statistics for U.S. States and Territories",
      "topics": [
        "get_us_states_covid_stats"
      ]
    },
    {
      "page": "gonorrhea_ma_df",
      "title": "Weekly Gonorrhea Cases in Massachusetts",
      "topics": [
        "gonorrhea_ma_df"
      ]
    },
    {
      "page": "hepatitisA_df",
      "title": "Hepatitis A Prevalence in Bulgaria",
      "topics": [
        "hepatitisA_df"
      ]
    },
    {
      "page": "india_dengue_tbl_df",
      "title": "Dengue/DHF Situation in India Since 2017",
      "topics": [
        "india_dengue_tbl_df"
      ]
    },
    {
      "page": "infectiousR",
      "title": "infectiousR: Access Infectious and Epidemiological Data via 'disease.sh API'",
      "topics": [
        "infectiousR-package",
        "infectiousR"
      ]
    },
    {
      "page": "influenza_ice_df",
      "title": "Monthly Influenza Incidence in Iceland",
      "topics": [
        "influenza_ice_df"
      ]
    },
    {
      "page": "influenza_infections_df",
      "title": "Influenza Infections Time Series",
      "topics": [
        "influenza_infections_df"
      ]
    },
    {
      "page": "influenza_pneumonia_ts",
      "title": "US Pneumonia and Influenza Death Rates",
      "topics": [
        "influenza_pneumonia_ts"
      ]
    },
    {
      "page": "influenza_vax_survey_df",
      "title": "Influenza Vaccination Survey",
      "topics": [
        "influenza_vax_survey_df"
      ]
    },
    {
      "page": "korea_dengue_tbl_df",
      "title": "Imported Dengue Cases in Korea",
      "topics": [
        "korea_dengue_tbl_df"
      ]
    },
    {
      "page": "malaria_mice_df",
      "title": "Daily Measures of Malaria-Infected Mice",
      "topics": [
        "malaria_mice_df"
      ]
    },
    {
      "page": "measles_infections_df",
      "title": "Measles Infections Time Series",
      "topics": [
        "measles_infections_df"
      ]
    },
    {
      "page": "measles_survey_df",
      "title": "Measles Non-Vaccination Parent Survey",
      "topics": [
        "measles_survey_df"
      ]
    },
    {
      "page": "meningitis_df",
      "title": "Meningococcal Data with Missing Response",
      "topics": [
        "meningitis_df"
      ]
    },
    {
      "page": "rubella_austria_df",
      "title": "Rubella Prevalence in Austrian Males",
      "topics": [
        "rubella_austria_df"
      ]
    },
    {
      "page": "rubella_peru_df",
      "title": "Rubella in Peru Data",
      "topics": [
        "rubella_peru_df"
      ]
    },
    {
      "page": "sars_canada_df",
      "title": "Severe Acute Respiratory Syndrome in Canada, 2003",
      "topics": [
        "sars_canada_df"
      ]
    },
    {
      "page": "smallpox_nigeria_df",
      "title": "Smallpox in Abakaliki, Nigeria, 1967",
      "topics": [
        "smallpox_nigeria_df"
      ]
    },
    {
      "page": "spanish_flu_df",
      "title": "Daily 1918 Flu Deaths",
      "topics": [
        "spanish_flu_df"
      ]
    },
    {
      "page": "streptomycin_tbl_df",
      "title": "Tuberculosis Streptomycin RCT (1948)",
      "topics": [
        "streptomycin_tbl_df"
      ]
    },
    {
      "page": "us_covid_cases_df",
      "title": "US Lab-Confirmed COVID-19 Cases",
      "topics": [
        "us_covid_cases_df"
      ]
    },
    {
      "page": "view_datasets_infectiousR",
      "title": "View Available Datasets in infectiousR",
      "topics": [
        "view_datasets_infectiousR"
      ]
    },
    {
      "page": "zika_girardot_df",
      "title": "Zika in Girardot, Colombia, 2015",
      "topics": [
        "zika_girardot_df"
      ]
    },
    {
      "page": "zika_sanandres_df",
      "title": "Zika in San Andres, Colombia, 2015",
      "topics": [
        "zika_sanandres_df"
      ]
    }
  ],
  "_pkglogo": "https://github.com/lightbluetitan/infectiousr/raw/HEAD/man/figures/logo.png",
  "_readme": "https://github.com/lightbluetitan/infectiousr/raw/HEAD/README.md",
  "_rundeps": [
    "askpass",
    "cpp11",
    "curl",
    "generics",
    "httr",
    "jsonlite",
    "lubridate",
    "mime",
    "openssl",
    "R6",
    "sys",
    "timechange"
  ],
  "_vignettes": [
    {
      "source": "infectiousR_vignette.Rmd",
      "filename": "infectiousR_vignette.html",
      "title": "infectiousR: Access Infectious and Epidemiological Data via disease.sh API",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Functions for infectiousR",
        "US COVID-19 Statistics: Top 5 States by Total Cases",
        "COVID-19 Case Rates in Latin America",
        "Dataset Suffixes",
        "Datasets Included in infectiousR",
        "Conclusion"
      ],
      "created": "2025-06-09 07:29:10",
      "modified": "2025-11-09 13:07:54",
      "commits": 2
    }
  ],
  "_score": 5.205680635298498,
  "_indexed": true,
  "_nocasepkg": "infectiousr",
  "_universes": [
    "lightbluetitan"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.2",
      "date": "2026-05-15T08:51:33.000Z",
      "distro": "noble",
      "commit": "6d2357d3c940897b146843433ea8c274fb0d1513",
      "fileid": "3f404702ef9b214236d34ba9a090d20646c3111818f3dc460cf06a3f98a1791a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/lightbluetitan/actions/runs/25908870603"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.2",
      "date": "2026-05-15T08:51:19.000Z",
      "distro": "noble",
      "commit": "6d2357d3c940897b146843433ea8c274fb0d1513",
      "fileid": "faeeaad102b978b6a50e8764b96685ef096e5980339c24b5c1c83dd2969aebc5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/lightbluetitan/actions/runs/25908870603"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.2",
      "date": "2026-05-15T08:51:07.000Z",
      "commit": "6d2357d3c940897b146843433ea8c274fb0d1513",
      "fileid": "4490642635b431266202acc7697ea5e83d4b0cb9f4869ddb731e8f18d1818e2a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/lightbluetitan/actions/runs/25908870603"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.2",
      "date": "2026-05-15T08:50:26.000Z",
      "commit": "6d2357d3c940897b146843433ea8c274fb0d1513",
      "fileid": "581e5de9efcdfa9c9ddf82f234c83c5a25032e542fd1d3605cdd8ad17c71a6f2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/lightbluetitan/actions/runs/25908870603"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.2",
      "date": "2026-05-15T08:50:27.000Z",
      "commit": "6d2357d3c940897b146843433ea8c274fb0d1513",
      "fileid": "170835f49a56da42105ef227ee34b7d579129984c47a54f8fe92ca28f71c244a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/lightbluetitan/actions/runs/25908870603"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.2",
      "date": "2026-05-15T08:50:33.000Z",
      "commit": "6d2357d3c940897b146843433ea8c274fb0d1513",
      "fileid": "0be29842c9fd497f09d81d3c69cf583f2f8e89c0403d25ff1d59adc488ebb2bf",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/lightbluetitan/actions/runs/25908870603"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.2",
      "date": "2026-05-15T08:50:22.000Z",
      "commit": "6d2357d3c940897b146843433ea8c274fb0d1513",
      "fileid": "3aa7f406ab747db48196b62a48c6d651aa71d8e188f8b095fdf135100f16a0bf",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/lightbluetitan/actions/runs/25908870603"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.2",
      "date": "2026-06-02T19:34:54.000Z",
      "commit": "6d2357d3c940897b146843433ea8c274fb0d1513",
      "fileid": "7b8ab373b2db9163c55db03734570f8e41769f71cd9f8147e65355f9ccc7682b",
      "status": "success",
      "buildurl": "https://github.com/r-universe/lightbluetitan/actions/runs/25908870603"
    }
  ]
}